sample	chr	startpos	endpos	nMajor	nMinor
TCGA-AO-A12D	1	61735	6162586	1	1
TCGA-AO-A12D	1	6162823	7056969	2	0
TCGA-AO-A12D	1	7057482	34947597	1	1
TCGA-AO-A12D	1	34948867	36520724	2	0
TCGA-AO-A12D	1	36522455	48581474	1	0
TCGA-AO-A12D	1	48581496	50196976	2	0
TCGA-AO-A12D	1	50197382	54954182	1	0
TCGA-AO-A12D	1	54957108	55523741	2	0
TCGA-AO-A12D	1	55523973	84868698	1	1
TCGA-AO-A12D	1	84870432	85469289	2	0
TCGA-AO-A12D	1	85471313	110980345	1	1
TCGA-AO-A12D	1	110981059	111691267	3	1
TCGA-AO-A12D	1	111691954	118939793	1	1
TCGA-AO-A12D	1	118942021	119543222	2	0
TCGA-AO-A12D	1	119546887	121741181	1	1
TCGA-AO-A12D	1	143285278	162647124	2	1
TCGA-AO-A12D	1	162651076	162905029	3	0
TCGA-AO-A12D	1	162905048	173366340	2	1
TCGA-AO-A12D	1	173368407	175149787	3	0
TCGA-AO-A12D	1	175150943	200077212	2	1
TCGA-AO-A12D	1	200077738	201247003	6	1
TCGA-AO-A12D	1	201248059	203401258	4	1
TCGA-AO-A12D	1	203401333	204338848	2	1
TCGA-AO-A12D	1	204340006	205098253	7	0
TCGA-AO-A12D	1	205100193	205531045	4	1
TCGA-AO-A12D	1	205531075	208931967	2	1
TCGA-AO-A12D	1	208932022	211329930	5	1
TCGA-AO-A12D	1	211332260	212149105	2	1
TCGA-AO-A12D	1	212156750	212462074	5	0
TCGA-AO-A12D	1	212465383	215427410	2	1
TCGA-AO-A12D	1	215432119	216153607	4	1
TCGA-AO-A12D	1	216154068	217131183	8	1
TCGA-AO-A12D	1	217142972	220302101	2	1
TCGA-AO-A12D	1	220303230	221230986	5	0
TCGA-AO-A12D	1	221231430	222686889	4	1
TCGA-AO-A12D	1	222690479	222785222	6	2
TCGA-AO-A12D	1	222785968	222796835	3	0
TCGA-AO-A12D	1	222797690	224253993	12	0
TCGA-AO-A12D	1	224254785	224616947	3	0
TCGA-AO-A12D	1	224618472	225461457	2	1
TCGA-AO-A12D	1	225465182	226099341	6	1
TCGA-AO-A12D	1	226099921	227779588	4	1
TCGA-AO-A12D	1	227780332	229137483	6	1
TCGA-AO-A12D	1	229137628	229476384	8	0
TCGA-AO-A12D	1	229478207	231741327	4	1
TCGA-AO-A12D	1	231741538	234469356	1	1
TCGA-AO-A12D	1	234469407	234622472	2	0
TCGA-AO-A12D	1	234623398	243143622	2	1
TCGA-AO-A12D	1	243144364	243796906	2	0
TCGA-AO-A12D	1	243796996	248572774	1	1
TCGA-AO-A12D	1	248574146	248930189	3	0
TCGA-AO-A12D	2	12784	17084741	1	1
TCGA-AO-A12D	2	17084872	17810590	2	0
TCGA-AO-A12D	2	17810968	52731315	1	1
TCGA-AO-A12D	2	52733227	53007805	2	0
TCGA-AO-A12D	2	53007823	65745295	1	1
TCGA-AO-A12D	2	65748620	66183814	2	0
TCGA-AO-A12D	2	66184386	67255472	1	1
TCGA-AO-A12D	2	67257600	67786011	2	0
TCGA-AO-A12D	2	67791790	69298589	1	1
TCGA-AO-A12D	2	69298791	70468636	2	0
TCGA-AO-A12D	2	70470588	99444336	1	1
TCGA-AO-A12D	2	99444537	106755693	2	1
TCGA-AO-A12D	2	106759063	107308620	3	0
TCGA-AO-A12D	2	107312390	114155608	2	1
TCGA-AO-A12D	2	114155901	115370187	1	0
TCGA-AO-A12D	2	115373290	116484006	2	1
TCGA-AO-A12D	2	116484235	175036613	1	1
TCGA-AO-A12D	2	175037424	178152663	1	0
TCGA-AO-A12D	2	178152713	182735041	1	1
TCGA-AO-A12D	2	182737281	190654134	1	0
TCGA-AO-A12D	2	190654770	191661640	1	1
TCGA-AO-A12D	2	191663077	214313517	1	0
TCGA-AO-A12D	2	214313810	217963055	1	1
TCGA-AO-A12D	2	217965103	229874493	1	0
TCGA-AO-A12D	2	229874960	242147305	1	1
TCGA-AO-A12D	3	18667	556498	1	1
TCGA-AO-A12D	3	557094	1049176	2	0
TCGA-AO-A12D	3	1049342	7562007	1	1
TCGA-AO-A12D	3	7562021	8214065	2	0
TCGA-AO-A12D	3	8214793	27145531	1	1
TCGA-AO-A12D	3	27149676	27810509	2	0
TCGA-AO-A12D	3	27810694	43088618	1	1
TCGA-AO-A12D	3	43088709	43760434	2	0
TCGA-AO-A12D	3	43760449	81378667	1	1
TCGA-AO-A12D	3	81378897	82098012	3	0
TCGA-AO-A12D	3	82098138	87599613	1	1
TCGA-AO-A12D	3	87600184	89974169	2	0
TCGA-AO-A12D	3	89974729	103840247	1	0
TCGA-AO-A12D	3	103843723	111362491	2	0
TCGA-AO-A12D	3	111365606	122597683	2	1
TCGA-AO-A12D	3	122601796	123133157	3	0
TCGA-AO-A12D	3	123133482	143138052	2	1
TCGA-AO-A12D	3	143142688	162128284	2	0
TCGA-AO-A12D	3	162132723	163538768	2	1
TCGA-AO-A12D	3	163546033	189834372	2	0
TCGA-AO-A12D	3	189834582	190874697	3	1
TCGA-AO-A12D	3	190877992	191050176	2	0
TCGA-AO-A12D	3	191050818	194957286	2	2
TCGA-AO-A12D	3	194961674	197085731	2	1
TCGA-AO-A12D	3	197086173	198169247	2	0
TCGA-AO-A12D	4	12281	56828562	1	0
TCGA-AO-A12D	4	56831429	57901469	4	0
TCGA-AO-A12D	4	57901693	58605152	2	0
TCGA-AO-A12D	4	58605455	65518554	1	0
TCGA-AO-A12D	4	65518642	66821174	2	0
TCGA-AO-A12D	4	66829999	72874957	1	0
TCGA-AO-A12D	4	72878431	74757055	6	0
TCGA-AO-A12D	4	74757274	75105711	1	0
TCGA-AO-A12D	4	75105947	76126393	7	0
TCGA-AO-A12D	4	76131905	91461567	1	0
TCGA-AO-A12D	4	91461675	91973569	5	0
TCGA-AO-A12D	4	91976448	93818238	3	1
TCGA-AO-A12D	4	93818636	96637465	1	0
TCGA-AO-A12D	4	96637828	97120118	3	1
TCGA-AO-A12D	4	97120339	99227545	3	0
TCGA-AO-A12D	4	99232992	100807664	1	0
TCGA-AO-A12D	4	100807833	101413927	3	1
TCGA-AO-A12D	4	101414794	140165841	1	0
TCGA-AO-A12D	4	140166569	141885328	4	0
TCGA-AO-A12D	4	141886724	143577711	6	0
TCGA-AO-A12D	4	143583409	143768423	1	0
TCGA-AO-A12D	4	143768444	144274912	4	0
TCGA-AO-A12D	4	144275053	146799813	5	0
TCGA-AO-A12D	4	146802878	190106768	1	0
TCGA-AO-A12D	5	15532	130929420	1	1
TCGA-AO-A12D	5	130929804	132210587	2	0
TCGA-AO-A12D	5	132211578	181363319	1	1
TCGA-AO-A12D	6	149661	398242	2	0
TCGA-AO-A12D	6	402087	13313612	1	1
TCGA-AO-A12D	6	13313638	13836113	2	0
TCGA-AO-A12D	6	13836813	30819816	1	1
TCGA-AO-A12D	6	30820811	31301605	2	0
TCGA-AO-A12D	6	31301745	72819582	1	1
TCGA-AO-A12D	6	72819638	77401281	2	0
TCGA-AO-A12D	6	77406551	169454658	1	1
TCGA-AO-A12D	6	169454763	170408127	2	0
TCGA-AO-A12D	6	170411394	170741917	1	1
TCGA-AO-A12D	7	43259	709285	2	0
TCGA-AO-A12D	7	716986	19445896	1	1
TCGA-AO-A12D	7	19446241	20135593	2	0
TCGA-AO-A12D	7	20136277	25329026	1	1
TCGA-AO-A12D	7	25329297	25561508	2	0
TCGA-AO-A12D	7	25562611	32424321	1	1
TCGA-AO-A12D	7	32425335	33012338	2	0
TCGA-AO-A12D	7	33013487	50829774	1	1
TCGA-AO-A12D	7	50834372	51380512	2	0
TCGA-AO-A12D	7	51395349	65431781	1	1
TCGA-AO-A12D	7	65432189	66937331	2	0
TCGA-AO-A12D	7	66937586	67763658	1	1
TCGA-AO-A12D	7	67765269	67802362	15	4
TCGA-AO-A12D	7	67804534	69308293	1	1
TCGA-AO-A12D	7	69313207	69450999	9	3
TCGA-AO-A12D	7	69451080	71650619	2	1
TCGA-AO-A12D	7	71650721	71734925	2	0
TCGA-AO-A12D	7	71736227	72955017	20	0
TCGA-AO-A12D	7	72960046	76083772	7	0
TCGA-AO-A12D	7	76090137	122276319	1	1
TCGA-AO-A12D	7	122276749	159334314	1	0
TCGA-AO-A12D	8	81254	46028855	1	0
TCGA-AO-A12D	8	46029741	60095132	3	1
TCGA-AO-A12D	8	60095152	60967124	3	0
TCGA-AO-A12D	8	60970192	106150875	3	1
TCGA-AO-A12D	8	106153427	106777782	4	0
TCGA-AO-A12D	8	106778867	126677007	3	1
TCGA-AO-A12D	8	126678950	127054783	4	0
TCGA-AO-A12D	8	127055055	137166777	3	1
TCGA-AO-A12D	8	137166859	137612353	4	0
TCGA-AO-A12D	8	137617381	145072769	3	1
TCGA-AO-A12D	9	46587	33753949	1	1
TCGA-AO-A12D	9	33754410	35135828	2	0
TCGA-AO-A12D	9	35136149	96260256	1	1
TCGA-AO-A12D	9	96262126	97790536	2	0
TCGA-AO-A12D	9	97790885	119551185	1	1
TCGA-AO-A12D	9	119551803	121237098	2	0
TCGA-AO-A12D	9	121240519	138200944	1	1
TCGA-AO-A12D	10	26823	768342	2	0
TCGA-AO-A12D	10	769281	42358241	1	1
TCGA-AO-A12D	10	42358254	43851615	2	1
TCGA-AO-A12D	10	43851798	56293999	1	0
TCGA-AO-A12D	10	56294049	58380024	2	0
TCGA-AO-A12D	10	58380949	59313206	1	1
TCGA-AO-A12D	10	59313854	60133079	1	0
TCGA-AO-A12D	10	60133975	71966373	1	1
TCGA-AO-A12D	10	71968149	75274305	2	0
TCGA-AO-A12D	10	75274458	81126675	1	1
TCGA-AO-A12D	10	81128397	84056201	2	1
TCGA-AO-A12D	10	84057169	133769379	1	0
TCGA-AO-A12D	11	198572	25736195	1	1
TCGA-AO-A12D	11	25736239	26027825	2	0
TCGA-AO-A12D	11	26027948	38481836	1	1
TCGA-AO-A12D	11	38483645	39999642	2	0
TCGA-AO-A12D	11	40000229	44447148	1	1
TCGA-AO-A12D	11	44447233	44907757	2	0
TCGA-AO-A12D	11	44908287	49131689	1	1
TCGA-AO-A12D	11	49132649	55510624	2	0
TCGA-AO-A12D	11	55510915	104324247	1	1
TCGA-AO-A12D	11	104325060	105838424	2	0
TCGA-AO-A12D	11	105839097	135074876	1	1
TCGA-AO-A12D	12	51460	30716240	1	0
TCGA-AO-A12D	12	30716601	31504995	2	1
TCGA-AO-A12D	12	31521589	31698110	7	1
TCGA-AO-A12D	12	31698161	32073117	1	1
TCGA-AO-A12D	12	32075019	32935416	1	0
TCGA-AO-A12D	12	32937422	38851054	3	0
TCGA-AO-A12D	12	38851318	44809848	1	1
TCGA-AO-A12D	12	44810233	46121176	2	0
TCGA-AO-A12D	12	46121214	87827205	1	1
TCGA-AO-A12D	12	87829908	89009294	2	0
TCGA-AO-A12D	12	89009648	109860851	1	1
TCGA-AO-A12D	12	109860991	112826496	2	0
TCGA-AO-A12D	12	112827092	133201603	1	1
TCGA-AO-A12D	13	18452809	21952752	1	1
TCGA-AO-A12D	13	21958017	21987039	3	0
TCGA-AO-A12D	13	21987143	23036692	2	0
TCGA-AO-A12D	13	23037335	28305784	1	1
TCGA-AO-A12D	13	28307021	29052518	2	0
TCGA-AO-A12D	13	29053706	39430711	1	1
TCGA-AO-A12D	13	39433062	40067772	2	0
TCGA-AO-A12D	13	40068483	71826433	1	1
TCGA-AO-A12D	13	71826913	72203570	2	0
TCGA-AO-A12D	13	72205499	86281929	1	1
TCGA-AO-A12D	13	86282564	87467042	2	0
TCGA-AO-A12D	13	87469113	98751357	1	1
TCGA-AO-A12D	13	98751408	99106543	3	0
TCGA-AO-A12D	13	99107478	105923892	1	1
TCGA-AO-A12D	13	105924147	106041718	2	0
TCGA-AO-A12D	13	106043698	114196802	1	1
TCGA-AO-A12D	13	114198282	114342922	2	0
TCGA-AO-A12D	14	18225647	29383091	1	1
TCGA-AO-A12D	14	29383848	30823466	2	1
TCGA-AO-A12D	14	30824142	32705079	1	1
TCGA-AO-A12D	14	32706616	34634943	2	1
TCGA-AO-A12D	14	34638886	72224025	1	1
TCGA-AO-A12D	14	72224781	72503794	2	0
TCGA-AO-A12D	14	72508738	101475335	1	1
TCGA-AO-A12D	14	101476101	106877229	1	0
TCGA-AO-A12D	15	19811075	29112738	1	0
TCGA-AO-A12D	15	29113172	29923428	2	1
TCGA-AO-A12D	15	29926110	54076647	1	0
TCGA-AO-A12D	15	54077567	57954498	1	1
TCGA-AO-A12D	15	57954570	83652677	1	0
TCGA-AO-A12D	15	83656611	89012406	2	0
TCGA-AO-A12D	15	89013652	94585121	4	0
TCGA-AO-A12D	15	94585332	96062732	3	0
TCGA-AO-A12D	15	96062992	100888995	4	0
TCGA-AO-A12D	15	100889816	101928837	1	1
TCGA-AO-A12D	16	10777	36048855	1	1
TCGA-AO-A12D	16	46429870	48166449	2	0
TCGA-AO-A12D	16	48168592	70836353	1	1
TCGA-AO-A12D	16	70839198	71373479	2	0
TCGA-AO-A12D	16	71374572	90221127	1	1
TCGA-AO-A12D	17	150733	19739703	1	0
TCGA-AO-A12D	17	19741568	22073683	1	1
TCGA-AO-A12D	17	22167265	28002669	2	0
TCGA-AO-A12D	17	28003311	29679262	7	0
TCGA-AO-A12D	17	29682268	39186594	1	0
TCGA-AO-A12D	17	39193016	39334541	52	0
TCGA-AO-A12D	17	39335415	40387144	19	0
TCGA-AO-A12D	17	40388192	48340414	1	0
TCGA-AO-A12D	17	48340929	48590640	19	0
TCGA-AO-A12D	17	48594430	76441839	1	0
TCGA-AO-A12D	17	76442038	83090856	1	1
TCGA-AO-A12D	18	48133	13565099	1	1
TCGA-AO-A12D	18	13567392	15402409	2	0
TCGA-AO-A12D	18	20949392	80257174	1	0
TCGA-AO-A12D	19	90910	6885312	1	0
TCGA-AO-A12D	19	6890139	20487838	2	1
TCGA-AO-A12D	19	20498562	21623186	2	0
TCGA-AO-A12D	19	21632117	23325786	2	1
TCGA-AO-A12D	19	23326030	28202728	3	0
TCGA-AO-A12D	19	28206472	30257092	2	1
TCGA-AO-A12D	19	30260800	58586487	2	0
TCGA-AO-A12D	20	80664	8415456	1	1
TCGA-AO-A12D	20	8415810	8938247	2	0
TCGA-AO-A12D	20	8938358	44779770	1	1
TCGA-AO-A12D	20	44780268	45698150	1	0
TCGA-AO-A12D	20	45699170	54951470	1	1
TCGA-AO-A12D	20	54951550	55757504	3	1
TCGA-AO-A12D	20	55758269	56825399	2	1
TCGA-AO-A12D	20	56825489	57841219	1	1
TCGA-AO-A12D	20	57845042	59496316	2	1
TCGA-AO-A12D	20	59496775	62405352	1	0
TCGA-AO-A12D	20	62422274	64324800	2	1
TCGA-AO-A12D	21	10336543	18481026	2	1
TCGA-AO-A12D	21	18481898	18481898	0	0
TCGA-AO-A12D	21	18482227	18498945	2	0
TCGA-AO-A12D	21	18504365	19142301	12	1
TCGA-AO-A12D	21	19148783	46122306	2	1
TCGA-AO-A12D	21	46122464	46677045	3	0
TCGA-AO-A12D	22	15294545	20111021	1	1
TCGA-AO-A12D	22	20114567	24773173	2	1
TCGA-AO-A12D	22	24773582	26293669	1	1
TCGA-AO-A12D	22	26293734	26649540	2	1
TCGA-AO-A12D	22	26652894	30870007	1	1
TCGA-AO-A12D	22	30876480	32268254	2	0
TCGA-AO-A12D	22	32268625	40043172	1	1
TCGA-AO-A12D	22	40055085	41995013	4	1
TCGA-AO-A12D	22	41996556	45667695	2	1
TCGA-AO-A12D	22	45669583	50796027	1	1
TCGA-AO-A12D	X	251810	920268	1	0
TCGA-AO-A12D	X	920280	4538654	1	1
TCGA-AO-A12D	X	4538970	34681829	1	0
TCGA-AO-A12D	X	34682594	34985877	2	1
TCGA-AO-A12D	X	34991181	44415768	1	0
TCGA-AO-A12D	X	44420164	48591680	1	1
TCGA-AO-A12D	X	48592129	50998783	2	0
TCGA-AO-A12D	X	51002333	54892038	1	0
TCGA-AO-A12D	X	54893033	64529274	1	1
TCGA-AO-A12D	X	64533678	67698249	2	0
TCGA-AO-A12D	X	67700597	70420671	1	0
TCGA-AO-A12D	X	70420850	72303800	1	1
TCGA-AO-A12D	X	72304125	76186060	2	0
TCGA-AO-A12D	X	76186546	79080307	1	1
TCGA-AO-A12D	X	79081983	116660619	1	0
TCGA-AO-A12D	X	116664161	117566084	2	1
TCGA-AO-A12D	X	117568912	141639892	1	0
TCGA-AO-A12D	X	141640048	142450686	2	0
TCGA-AO-A12D	X	142453702	145171331	1	1
TCGA-AO-A12D	X	145171370	145732342	2	0
TCGA-AO-A12D	X	145734476	146683492	1	1
TCGA-AO-A12D	X	146685343	156004181	1	0
